BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E10SP1|AL425883
(822 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1638 675 0.0
>3x_Contig1638
Length = 14042
Score = 675 bits (337), Expect = 0.0
Identities = 696/823 (84%), Gaps = 1/823 (0%)
Strand = Plus / Minus
Query: 1 tacnatcccaacccttttcttcaactatcccttcaaaaccactttccacttctccattta 60
||| |||||||||||| |||||||| ||||||||||||| ||| ||||||||||||| |
Sbjct: 10463 tacgatcccaacccttgtcttcaacgatcccttcaaaacgactggccacttctccattga 10404
Query: 61 aacccacacataactcttcctttaattccaacaccaa-tcctccatttttacttcaaant 119
|||| ||| ||||||| |||| ||| |||||| || || |||| || ||||||| |
Sbjct: 10403 aaccggcacgtaactctgccttgaatggcaacacgaagtcgtccaggttgacttcaaggt 10344
Query: 120 ctctaactactcatcaaattattaaccataccaatcttccttcctcaacacaacccaaat 179
||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||
Sbjct: 10343 ctctaactactcatcaaatgatgaaccatacggatctgccttcctcaacacaacccaaat 10284
Query: 180 ctaataccaattccaacacaaacctctctttcaatttcacaccacaaacaaacatatcca 239
||||||||| ||||||||||| ||||||| ||||||||||||||| |||||||||||||
Sbjct: 10283 ctaataccagttccaacacaagcctctctggcaatttcacaccacagacaaacatatcca 10224
Query: 240 acaaaatttcacatttaaacaattaaattaacaaattaaaacaaaaaaaacaaaaatttc 299
||| ||| |||||||||||| || || | |||||||||| |||| | | |||| ||| |
Sbjct: 10223 acagaatgtcacatttaaacgatgaagtgaacaaattaagacaagagagacaagaatggc 10164
Query: 300 taatctaacccaaccatctcttatccaacttaaatcaatccaatttacaactttccaaat 359
||| | | |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10163 taagggagcgcaacgatctcttatccaacttaaatcaatccaatttacaactttccaaag 10104
Query: 360 taaataaactctttaaccaatcttaaacatacttttccaatttacaaaaccaatttcaaa 419
||||||||||||| ||| | ||| | |||||| ||||||||||||||| ||||| ||
Sbjct: 10103 taaataaactcttgaacgagtctgagacatacgtttccaatttacaaaggcaattgcagg 10044
Query: 420 attccaaatatcaatttaactctaaaaatttaaatatcaataaattaaataataaactta 479
|||| || ||||||| ||| |||| |||||||| ||||| | ||| | | |||||| |
Sbjct: 10043 attcgaaggatcaattgaacgctaagaatttaaagatcaaggagttagagagtaaactga 9984
Query: 480 cctcccntacttcctataccatttcaacatattcacccatatcctcttccattaacataa 539
| | ||||||| ||||||| |||||| |||||||||||||||| ||||||| || |
Sbjct: 9983 cgggcggtacttccgataccatgtcaacagattcacccatatcctcgtccattagcagag 9924
Query: 540 naatattaacancaactaccttatcacctcttatatctactaaaaatwctaccactcctc 599
|| ||||||| ||||||||||||||||||| | ||||||||||||| |||| |||||||
Sbjct: 9923 gaagattaacagcaactaccttatcacctctgagatctactaaaaatgctacgactcctc 9864
Query: 600 aaaagntcaaatcscctagtkaaaatagcsacgatctacctaaacgtgtcaattccctaa 659
||| | ||| ||| |||||| ||| |||| |||||||||||| |||||||||||||||||
Sbjct: 9863 aaagggtcagatcgcctagtgaaagtagcgacgatctacctagacgtgtcaattccctaa 9804
Query: 660 acttkaacaaccatatwttkcaaaawgaatcgttgaaacvaactgcaaaaattacgaacc 719
|||| ||||||||||| || ||| | ||||||| ||||| | ||||| || |||||||||
Sbjct: 9803 acttgaacaaccatatgttgcaagaggaatcgtggaaacgagctgcagaagttacgaacc 9744
Query: 720 aattaaaadcacgtatanaaaaaattawrnccaaatccaagtccggtttcaacaatctcg 779
||||||| |||||||| ||| ||| | ||||||||| ||||||||||||||||||||
Sbjct: 9743 aattaaaggcacgtatagaaagaatgagggccaaatccaggtccggtttcaacaatctcg 9684
Query: 780 gcgtarattaataaaatccactatgtacaaaataaattcctgt 822
||||| ||||| | |||||||||||||||||||| ||||||||
Sbjct: 9683 gcgtagattaagagaatccactatgtacaaaatagattcctgt 9641
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7977
Number of Sequences: 1807
Number of extensions: 7977
Number of successful extensions: 293
Number of sequences better than 1.0e-20: 1
length of query: 822
length of database: 10,358,551
effective HSP length: 16
effective length of query: 806
effective length of database: 10,329,639
effective search space: 8325689034
effective search space used: 8325689034
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)